Index

A | B | C | D | E | F | G | H | I | J | K | L | M | N | P | Q | R | S | T | U | V | W | Y

A

adjust_forces() (matscipy.fracture_mechanics.crack.ConstantStrainRate method)
adjust_positions() (matscipy.fracture_mechanics.crack.ConstantStrainRate method)
all_brackets (matscipy.surface.MillerIndex attribute)
allow_reuse_address (matscipy.socketcalc.AtomsServer attribute)
angle() (matscipy.surface.MillerIndex method)
angle_between() (in module matscipy.surface)
angle_distribution() (in module matscipy.angle_distribution)
array_inverse() (in module matscipy.atomic_strain)
as3() (matscipy.surface.MillerIndex method)
as4() (matscipy.surface.MillerIndex method)
atomic_strain() (in module matscipy.atomic_strain)
AtomsRequestHandler (class in matscipy.socketcalc)
AtomsServer (class in matscipy.socketcalc)

B

brackets (matscipy.surface.MillerIndex attribute)

C

calculate() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
(matscipy.socketcalc.SocketCalculator method)
centerline_stress() (in module matscipy.contact_mechanics.Hertz)
centrosymmetry() (in module matscipy.structure_identification)
Checkpoint (class in matscipy.checkpoint)
Client (class in matscipy.socketcalc)
cluster() (in module matscipy.fracture_mechanics.clusters)
compliance() (matscipy.elasticity.CubicElasticModuli method)
ConstantStrainRate (class in matscipy.fracture_mechanics.crack)
copy() (matscipy.fracture_mechanics.crack.ConstantStrainRate method)
cosine() (matscipy.surface.MillerIndex method)
crack_tip_position() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
crack_tip_position_y() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
cross() (matscipy.surface.MillerIndex method)
cubic_to_Voigt_6x6() (in module matscipy.elasticity)
CubicCrystalCrack (class in matscipy.fracture_mechanics.crack)
CubicElasticModuli (class in matscipy.elasticity)

D

default_parameters (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid attribute)
deformation_gradient() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
(matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
deformation_gradient_from_cartesian_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
deformation_gradient_from_cylinder_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
deformation_gradient_residual() (in module matscipy.fracture_mechanics.crack)
deformation_gradient_residuals() (in module matscipy.fracture_mechanics.crack)
diamond() (in module matscipy.fracture_mechanics.clusters)
displacement_residual() (in module matscipy.fracture_mechanics.crack)
displacement_residuals() (in module matscipy.fracture_mechanics.crack)
displacements() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
(matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
displacements_from_cartesian_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
displacements_from_cylinder_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)

E

extend_strip() (in module matscipy.fracture_mechanics.idealbrittlesolid)
extra_args() (matscipy.socketcalc.Client method)

F

fcc() (in module matscipy.fracture_mechanics.clusters)
find_crack_tip() (in module matscipy.fracture_mechanics.idealbrittlesolid)
find_tip_coordination() (in module matscipy.fracture_mechanics.crack)
find_tip_stress_field() (in module matscipy.fracture_mechanics.crack)
fit_crack_stress_field() (in module matscipy.fracture_mechanics.crack)
fit_elastic_constants() (in module matscipy.elasticity)
flatten() (in module matscipy.logger)
flush() (matscipy.checkpoint.Checkpoint method)
(matscipy.logger.Logger method)
full_3x3_to_Voigt_6_index() (in module matscipy.elasticity)
full_3x3_to_Voigt_6_strain() (in module matscipy.elasticity)
full_3x3_to_Voigt_6_stress() (in module matscipy.elasticity)
full_3x3x3x3_to_Voigt_6x6() (in module matscipy.elasticity)

G

G_to_strain() (in module matscipy.fracture_mechanics.crack)
gcd() (in module matscipy.surface)
generate_strained_configs() (in module matscipy.elasticity)
get_D_square_min() (in module matscipy.atomic_strain)
get_delta_plus_epsilon() (in module matscipy.atomic_strain)
get_delta_plus_epsilon_dgesv() (in module matscipy.atomic_strain)
get_elastic_moduli() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
get_energy_release_rate() (in module matscipy.fracture_mechanics.crack)
get_logfile() (matscipy.logger.Logger method)
get_poisson_ratio() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
get_results() (matscipy.socketcalc.AtomsServer method)
get_strain() (in module matscipy.fracture_mechanics.crack)
get_stress_intensity_factor() (in module matscipy.fracture_mechanics.crack)
get_stresses() (matscipy.fracture_mechanics.crack.IsotropicStressField method)
get_wave_speeds() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
get_XIJ() (in module matscipy.atomic_strain)
get_YIJ() (in module matscipy.atomic_strain)
get_youngs_modulus() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
gf_displacement_nonperiodic() (in module matscipy.contact_mechanics.greens_function)
gf_subsurface_stress_nonperiodic() (in module matscipy.contact_mechanics.greens_function)

H

handle() (matscipy.socketcalc.AtomsRequestHandler method)
has_logfile() (matscipy.logger.Logger method)
hat() (matscipy.surface.MillerIndex method)
hdr_str() (in module matscipy.logger)
hdrfmt_str() (in module matscipy.logger)
hydrogenate() (in module matscipy.hydrogenate)

I

IdealBrittleSolid (class in matscipy.fracture_mechanics.idealbrittlesolid)
implemented_properties (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid attribute)
(matscipy.socketcalc.SocketCalculator attribute)
invariants() (in module matscipy.elasticity)
is_compatible() (matscipy.socketcalc.Client method)
(matscipy.socketcalc.VaspClient method)
isotropic_modeI_crack_tip_displacement_field() (in module matscipy.fracture_mechanics.crack)
isotropic_modeI_crack_tip_stress_field() (in module matscipy.fracture_mechanics.crack)
IsotropicStressField (class in matscipy.fracture_mechanics.crack)
iteration_finished() (matscipy.logger.Logger method)

J

J_integral() (in module matscipy.fracture_mechanics.energy_release)
join_all() (matscipy.socketcalc.AtomsServer method)

K

k1g() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
(matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
k1gsqG() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
(matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)

L

latex() (matscipy.surface.MillerIndex method)
load() (matscipy.checkpoint.Checkpoint method)
loadtbl() (in module matscipy.io)
Logger (class in matscipy.logger)

M

matscipy (module)
matscipy.angle_distribution (module)
matscipy.atomic_strain (module)
matscipy.checkpoint (module)
matscipy.contact_mechanics (module)
matscipy.contact_mechanics.DMT (module)
matscipy.contact_mechanics.greens_function (module)
matscipy.contact_mechanics.Hertz (module)
matscipy.contact_mechanics.JKR (module)
matscipy.elasticity (module)
matscipy.fracture_mechanics (module)
matscipy.fracture_mechanics.clusters (module)
matscipy.fracture_mechanics.crack (module)
matscipy.fracture_mechanics.crackpathsel (module)
matscipy.fracture_mechanics.energy_release (module)
matscipy.fracture_mechanics.idealbrittlesolid (module)
matscipy.hydrogenate (module)
matscipy.io (module)
matscipy.logger (module)
matscipy.neighbours (module)
matscipy.rings (module)
matscipy.socketcalc (module)
matscipy.structure_identification (module)
matscipy.surface (module)
measure_triclinic_elastic_constants() (in module matscipy.elasticity)
mic() (in module matscipy.neighbours)
MillerDirection() (in module matscipy.surface)
MillerIndex (class in matscipy.surface)
MillerPlane() (in module matscipy.surface)
min_ccg() (in module matscipy.contact_mechanics.greens_function)

N

neighbour_list() (in module matscipy.neighbours)
NoCheckpoint
norm() (matscipy.surface.MillerIndex method)
normalised() (matscipy.surface.MillerIndex method)
numfmt_str() (in module matscipy.logger)

P

pack_atoms_to_reftraj_str() (in module matscipy.socketcalc)
pack_atoms_to_xyz_str() (in module matscipy.socketcalc)
pack_results_to_reftraj_output_str() (in module matscipy.socketcalc)
parameter() (in module matscipy)
parse() (matscipy.surface.MillerIndex class method)
plane_spacing() (matscipy.surface.MillerIndex method)
plot_stress_fields() (in module matscipy.fracture_mechanics.crack)
poisson_ratio() (in module matscipy.elasticity)
postprocess() (matscipy.socketcalc.Client method)
(matscipy.socketcalc.VaspClient method)
pr() (matscipy.logger.Logger method)
preprocess() (matscipy.socketcalc.Client method)
(matscipy.socketcalc.VaspClient method)
print_crack_system() (in module matscipy.fracture_mechanics.crack)
put() (matscipy.socketcalc.AtomsServer method)

Q

QUIPClient (class in matscipy.socketcalc)

R

radius() (in module matscipy.contact_mechanics.JKR)
radius_and_pressure() (in module matscipy.contact_mechanics.DMT)
(in module matscipy.contact_mechanics.Hertz)
reciprocal_grid() (in module matscipy.contact_mechanics.greens_function)
reciprocal_stiffness_periodic() (in module matscipy.contact_mechanics.greens_function)
RectilinearAnisotropicCrack (class in matscipy.fracture_mechanics.crack)
ring_statistics() (in module matscipy.rings)
rotate() (matscipy.elasticity.CubicElasticModuli method)
rotate_cubic_elastic_constants() (in module matscipy.elasticity)
rotate_elastic_constants() (in module matscipy.elasticity)
rtheta() (matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)

S

save() (matscipy.checkpoint.Checkpoint method)
savetbl() (in module matscipy.io)
sc() (in module matscipy.fracture_mechanics.clusters)
scale_displacements() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
server_activate() (matscipy.socketcalc.AtomsServer method)
set_constraints() (in module matscipy.fracture_mechanics.idealbrittlesolid)
set_groups() (in module matscipy.fracture_mechanics.clusters)
set_initial_velocities() (in module matscipy.fracture_mechanics.idealbrittlesolid)
set_logfile() (matscipy.logger.Logger method)
set_outevery() (matscipy.logger.Logger method)
set_plane_strain() (matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
set_plane_stress() (matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
set_reference_crystal() (matscipy.fracture_mechanics.idealbrittlesolid.IdealBrittleSolid method)
shutdown() (matscipy.socketcalc.AtomsServer method)
(matscipy.socketcalc.Client method)
(matscipy.socketcalc.SocketCalculator method)
shutdown_clients() (matscipy.socketcalc.AtomsServer method)
simplified() (matscipy.surface.MillerIndex method)
simplify() (matscipy.surface.MillerIndex method)
SocketCalculator (class in matscipy.socketcalc)
st() (matscipy.logger.Logger method)
start() (matscipy.socketcalc.Client method)
start_or_restart() (matscipy.socketcalc.Client method)
stiffness() (matscipy.elasticity.CubicElasticModuli method)
strain_to_G() (in module matscipy.fracture_mechanics.crack)
stress() (in module matscipy.contact_mechanics.Hertz)
stresses() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
(matscipy.fracture_mechanics.crack.RectilinearAnisotropicCrack method)
stresses_from_cartesian_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
stresses_from_cylinder_coordinates() (matscipy.fracture_mechanics.crack.CubicCrystalCrack method)
surface_displacements() (in module matscipy.contact_mechanics.DMT)
(in module matscipy.contact_mechanics.Hertz)
surface_stress() (in module matscipy.contact_mechanics.DMT)
(in module matscipy.contact_mechanics.Hertz)

T

thin_strip_displacement_y() (in module matscipy.fracture_mechanics.crack)
tol (matscipy.elasticity.CubicElasticModuli attribute)
triangular_lattice_slab() (in module matscipy.fracture_mechanics.idealbrittlesolid)

U

unpack_reftraj_output_str_to_results() (in module matscipy.socketcalc)
unpack_reftraj_str_to_atoms() (in module matscipy.socketcalc)
unpack_xyz_str_to_results() (in module matscipy.socketcalc)

V

VaspClient (class in matscipy.socketcalc)
Voigt_6_to_full_3x3_strain() (in module matscipy.elasticity)
Voigt_6_to_full_3x3_stress() (in module matscipy.elasticity)
Voigt_6x6_to_cubic() (in module matscipy.elasticity)
Voigt_6x6_to_full_3x3x3x3() (in module matscipy.elasticity)

W

wait_for_shutdown() (matscipy.socketcalc.Client method)
warn() (matscipy.logger.Logger method)
write_input_files() (matscipy.socketcalc.Client method)
(matscipy.socketcalc.QUIPClient method)
(matscipy.socketcalc.VaspClient method)

Y

youngs_modulus() (in module matscipy.elasticity)